CDS

Accession Number TCMCG051C12663
gbkey CDS
Protein Id XP_024454436.1
Location complement(join(668448..669032,669626..669736,669817..669962,670256..670336,670644..670724,670963..671043,671135..671624))
Gene LOC18097370
GeneID 18097370
Organism Populus trichocarpa

Protein

Length 524aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024598668.1
Definition uncharacterized protein LOC18097370 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category T
Description Tyrosyl-DNA phosphodiesterase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K19619        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000287        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008081        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016605        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0030145        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070259        [VIEW IN EMBL-EBI]
GO:0070260        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAATCTTTGTTGCAAAAAATAACCTTCGTGCCCATCGTCATCATCTCTCCCCTTTCTAAACCTAGTAAAAGCTGCAATCTTTCTGTTCATCTCTCAAACCTCATGTCTTGGTCTTGCAAGAAGTGTACTTTCATTAACTCTCCATCACCAAAACCCACTTGCCAAATCTGTCTCTCACCTCCTTCACCCCCTCCACTACCTTCCTCTTCTTCAAATCAAGAAACCCCAAAATGGTCTTGCAAGGCTTGCACTTTCTTGAACCCGTATAAGAACAGTAGCTGTGAAGTATGTGGCACTAGAGGTTCTGTTTTTTCTCTTTCTAGTTTAGAGGATTTGACCGATACTAGTGGTCTTGATGGTGATGTGGATTCTTCTGTTGGGTCTGTTTTCATGCCCTTAAGGCATTGTAAGAGGAAGGTTAGAGACTCAGTTGACGATCATCAAGAGGGTGGGTTTCGTGGGGTTATGTCTTTGAACAATGTCGAAGTTGGAGGTGATGAGGATTCTGCGAAATTGGGTGCATTCCAAGGTGTTAAAGCATCAAACAAGGGAGTGACTGTTTTAAAGGATGGAGGTGATGGCCATAGTGTGAAATTGGGTGGGTTTCAAGGGGTTAAATCATCAAACAAGGGAGTCACAGTTCTAAAGGATGAAAGTGATGGGGCTAGTGTGAAATTGGGTGCGTTTCAAGGTGCTAGGGCATCAAACAAGGGAGTGGCTGTTTTGACAGAGGATACAAATTCAGCAGCAGTGCTTGGTTCCTTCAAGATTTTGAGCTATAATGTTTGGTTCCGAGAAGACCTGGAGATGCATAGGAGGATGAAAGCACTTGGGGAACTTATTCAACTACATTCACCAGATGTCATTTGTTTACAGGAGGTTATTCCAGATATATATGACATATTTCAGCGATCCAGCTGGTGGAAAGCTTATCAATGCTCTGTTTCTTCTGAAATAGCAAGTTCAAGAGGATACTTTTGCATGCAGTTAAGCAAACTGCCAGTAAAATCCTTCAGCACTAAACCCTTTATGAATTCAATAATGGGGAGAGAACTTTGCATTGCTGAGCTTGAAGTTCCAGGAAAAAAGTCATTAGTTGTTGCCACTAGCCATCTAGAGAGTCCATGTCCAGCACCTCCAAAATGGGATCAGATGTTCAGCAAGGAACGTGTGGATCAGGCAAAGGAGGCCATCAACCTTCTCAAGAAGAACTCAAATGTGATTTTTTGTGGTGACATGAACTGGGATGATAAGTTGGATGGTCAGTTTCCTTTCCCTGATGGATGGGTTGATGCCTGGGTAGAGTTGAAGCCAGGGGACAATGGATGGACATATGATACCAAATCCAATCAAATGTTGTCTGGTAATCGTGCATTGCAAAAGAGACTGGATCGATTCATATGCAGTCTGTGTGATTTCAAGATCAGTAAAATTGACATGATTGGTAAGGATGCAATACCTGGCTTATCATATATGAAGGAGAAGAAAGTGAGAAAAGAGGTAAAGATGTTGGAGTTACCTGTCTTGCCTAGTGACCATTATGGTTTGCTTTTAACAATATCCGGTCTGTAA
Protein:  
MQSLLQKITFVPIVIISPLSKPSKSCNLSVHLSNLMSWSCKKCTFINSPSPKPTCQICLSPPSPPPLPSSSSNQETPKWSCKACTFLNPYKNSSCEVCGTRGSVFSLSSLEDLTDTSGLDGDVDSSVGSVFMPLRHCKRKVRDSVDDHQEGGFRGVMSLNNVEVGGDEDSAKLGAFQGVKASNKGVTVLKDGGDGHSVKLGGFQGVKSSNKGVTVLKDESDGASVKLGAFQGARASNKGVAVLTEDTNSAAVLGSFKILSYNVWFREDLEMHRRMKALGELIQLHSPDVICLQEVIPDIYDIFQRSSWWKAYQCSVSSEIASSRGYFCMQLSKLPVKSFSTKPFMNSIMGRELCIAELEVPGKKSLVVATSHLESPCPAPPKWDQMFSKERVDQAKEAINLLKKNSNVIFCGDMNWDDKLDGQFPFPDGWVDAWVELKPGDNGWTYDTKSNQMLSGNRALQKRLDRFICSLCDFKISKIDMIGKDAIPGLSYMKEKKVRKEVKMLELPVLPSDHYGLLLTISGL